Protein FDR Confidence: Combined	Accession	Description	Exp. q-value: Combined	Sum PEP Score	Coverage [%]	# Peptides	# PSMs	# Unique Peptides	# AAs	MW [kDa]	calc. pI	# Peptides (by Search Engine): A2 Sequest HT (IgG 293)	# Peptides (by Search Engine): B2 Sequest HT (HKO 293)	# Peptides (by Search Engine): C2 Sequest HT (SKO 293)	# Peptides (by Search Engine): D2 Sequest HT (WT 293)	# PSMs (by Search Engine): A2 Sequest HT (IgG 293)	# PSMs (by Search Engine): B2 Sequest HT (HKO 293)	# PSMs (by Search Engine): C2 Sequest HT (SKO 293)	# PSMs (by Search Engine): D2 Sequest HT (WT 293)	Abundance: F5: Sample, IgG 293	Abundance: F6: Sample, HKO 293	Abundance: F7: Sample, SKO 293	Abundance: F8: Sample, WT 203	Abundances Count: F5: Sample, IgG 293	Abundances Count: F6: Sample, HKO 293	Abundances Count: F7: Sample, SKO 293	Abundances Count: F8: Sample, WT 203	Modifications	Biological Process	Cellular Component	Molecular Function	Pfam IDs	Entrez Gene ID	Ensembl Gene ID	Gene Symbol	Chromosome	Reactome Pathways	KEGG Pathways	# Razor Peptides
High	P55072	Transitional endoplasmic reticulum ATPase OS=Homo sapiens OX=9606 GN=VCP PE=1 SV=4	0	63.89	31	18	34	18	806	89.3	5.26			17	11			21	13	1802296.438	2071816.262	28799942.11	15170109.73	2	3	17	16	Met-loss+Acetyl [N-Term]	cell communication;cell organization and biogenesis;metabolic process;regulation of biological process;response to stimulus;transport	cytoplasm;cytosol;endoplasmic reticulum;extracellular;membrane;nucleus;organelle lumen;proteasome	catalytic activity;enzyme regulator activity;nucleotide binding;protein binding;RNA binding	"Pf00004, Pf00910, Pf01057, Pf01078, Pf02359, Pf02933, Pf05496, Pf05673, Pf06068, Pf07724, Pf07726, Pf07728, Pf09336, Pf13191, Pf13207, Pf13401"	7415	ENSG00000165280.15	VCP	9	Protein methylation; Translesion Synthesis by POLH; N-glycan trimming in the ER and Calnexin/Calreticulin cycle; Josephin domain DUBs; Ovarian tumor domain proteases; ABC-family proteins mediated transport; HSF1 activation; Hh mutants that don't undergo autocatalytic processing are degraded by ERAD; E3 ubiquitin ligases ubiquitinate target proteins; Neutrophil degranulation; Defective CFTR causes cystic fibrosis; Hedgehog ligand biogenesis	Protein processing in endoplasmic reticulum; Legionellosis	0

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