Protein FDR Confidence: Combined	Accession	Description	Exp. q-value: Combined	Sum PEP Score	Coverage [%]	# Peptides	# PSMs	# Unique Peptides	# AAs	MW [kDa]	calc. pI	# Peptides (by Search Engine): A2 Sequest HT (MEF IgG)	# Peptides (by Search Engine): B2 Sequest HT (MEF Sel1L KO)	# Peptides (by Search Engine): C2 Sequest HT (MEF WT)	# Peptides (by Search Engine): D2 Sequest HT (MEF H KO)	# PSMs (by Search Engine): A2 Sequest HT (MEF IgG)	# PSMs (by Search Engine): B2 Sequest HT (MEF Sel1L KO)	# PSMs (by Search Engine): C2 Sequest HT (MEF WT)	# PSMs (by Search Engine): D2 Sequest HT (MEF H KO)	Abundance: F5: Sample, MEF IgG	Abundance: F6: Sample, MEF Sel1L KO	Abundance: F7: Sample, MEF WT	Abundance: F8: Sample, MEF H KO	Abundances Count: F5: Sample, MEF IgG	Abundances Count: F6: Sample, MEF Sel1L KO	Abundances Count: F7: Sample, MEF WT	Abundances Count: F8: Sample, MEF H KO	Modifications	Biological Process	Cellular Component	Molecular Function	Pfam IDs	Entrez Gene ID	Ensembl Gene ID	Gene Symbol	Chromosome	Reactome Pathways	KEGG Pathways	# Razor Peptides
High	P62858	40S ribosomal protein S28 OS=Mus musculus OX=10090 GN=Rps28 PE=1 SV=1	0	23.006	71	5	27	5	69	7.8	10.7	3	2	5	3	8	6	7	6	150682383.5	45497457.09	117779802.6	248119822.4	4	3	5	4	Acetyl [N-Term]	cell organization and biogenesis;metabolic process	ribosome	RNA binding;structural molecule activity	Pf01200	54127	ENSMUSG00000067288.12	Rps28	17	"L13a-mediated translational silencing of Ceruloplasmin expression; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC); Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC); Ribosomal scanning and start codon recognition; GTP hydrolysis and joining of the 60S ribosomal subunit; Formation of a pool of free 40S subunits; SRP-dependent cotranslational protein targeting to membrane; Formation of the ternary complex, and subsequently, the 43S complex; Translation initiation complex formation"	Ribosome	0

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