Protein FDR Confidence: Combined	Accession	Description	Exp. q-value: Combined	Sum PEP Score	Coverage [%]	# Peptides	# PSMs	# Unique Peptides	# AAs	MW [kDa]	calc. pI	# Peptides (by Search Engine): A2 Sequest HT (IgG Adipo)	# Peptides (by Search Engine): B2 Sequest HT (SelL -/- Adipo)	# Peptides (by Search Engine): C2 Sequest HT	# Peptides (by Search Engine): D2 Sequest HT (Hrd1 -/- Adipo)	# PSMs (by Search Engine): A2 Sequest HT (IgG Adipo)	# PSMs (by Search Engine): B2 Sequest HT (SelL -/- Adipo)	# PSMs (by Search Engine): C2 Sequest HT	# PSMs (by Search Engine): D2 Sequest HT (Hrd1 -/- Adipo)	Abundance: F1: Sample, IgG Adipo	Abundance: F2: Sample, SelL -/- Adipo	Abundance: F3: Sample, WT Adipo	Abundance: F4: Sample, Hrd1 -/- Adipo	Abundances Count: F1: Sample, IgG Adipo	Abundances Count: F2: Sample, SelL -/- Adipo	Abundances Count: F3: Sample, WT Adipo	Abundances Count: F4: Sample, Hrd1 -/- Adipo	Modifications	Biological Process	Cellular Component	Molecular Function	Pfam IDs	Entrez Gene ID	Ensembl Gene ID	Gene Symbol	Chromosome	Reactome Pathways	KEGG Pathways	# Razor Peptides
High	P62806	Histone H4 OS=Mus musculus OX=10090 GN=H4c1 PE=1 SV=2	0	49.894	57	10	88	10	103	11.4	11.36	7	9	10	6	19	30	29	10	40070249.23	198537935.4	175724532.7	43576129.88	11	11	11	8		cell organization and biogenesis;metabolic process;regulation of biological process	chromosome;membrane;nucleus	DNA binding;protein binding;RNA binding	"Pf00125, Pf02969, Pf15630"	320332; 326619; 319160; 319155; 319158; 319161; 69386; 319157; 319159; 326620; 100041230; 319156; 97122; 102641229	ENSMUSG00000096010.2; ENSMUSG00000091405.2; ENSMUSG00000060981.6; ENSMUSG00000069274.3; ENSMUSG00000061482.6; ENSMUSG00000067455.5; ENSMUSG00000064288.4; ENSMUSG00000060678.4; ENSMUSG00000069306.5; ENSMUSG00000069305.3; ENSMUSG00000069266.5; ENSMUSG00000060093.6; ENSMUSG00000060639.5	Hist4h4; Hist1h4a; Hist1h4k; Hist1h4c; Hist1h4i; Hist1h4n; Hist1h4h; Hist1h4f; Hist1h4j; Hist1h4b; Hist1h4m; Hist1h4d; Hist2h4; LOC100862646; LOC102641229	6; 13; 3	Transcriptional regulation by small RNAs; RUNX1 regulates transcription of genes involved in differentiation of HSCs; HATs acetylate histones; Meiotic Recombination; HDMs demethylate histones; Deposition of new CENPA-containing nucleosomes at the centromere; Formation of the beta-catenin:TCF transactivating complex; PRC2 methylates histones and DNA; SUMOylation of chromatin organization proteins; Nonhomologous End-Joining (NHEJ); RMTs methylate histone arginines; NoRC negatively regulates rRNA expression; RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function; Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks; Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3; Oxidative Stress Induced Senescence; Senescence-Associated Secretory Phenotype (SASP); DNA Damage/Telomere Stress Induced Senescence; SIRT1 negatively regulates rRNA expression; Condensation of Prophase Chromosomes; B-WICH complex positively regulates rRNA expression; RNA Polymerase I Promoter Opening; NoRC negatively regulates rRNA expression; Meiotic Synapsis; G2/M DNA damage checkpoint; PKMTs methylate histone lysines; Mus musculus biological processes; RNA Polymerase I Chain Elongation	Alcoholism; Systemic lupus erythematosus; Viral carcinogenesis	0

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