Protein FDR Confidence: Combined	Accession	Description	Exp. q-value: Combined	Sum PEP Score	Coverage [%]	# Peptides	# PSMs	# Unique Peptides	# AAs	MW [kDa]	calc. pI	# Peptides (by Search Engine): E2 Sequest HT (Liver IgG)	# Peptides (by Search Engine): F2 Sequest HT (Liver SKO)	# Peptides (by Search Engine): G2 Sequest HT (Liver WT)	# Peptides (by Search Engine): H2 Sequest HT (Liver HKO)	# PSMs (by Search Engine): E2 Sequest HT (Liver IgG)	# PSMs (by Search Engine): F2 Sequest HT (Liver SKO)	# PSMs (by Search Engine): G2 Sequest HT (Liver WT)	# PSMs (by Search Engine): H2 Sequest HT (Liver HKO)	Abundance: F5: Sample, Liver IgG	Abundance: F6: Sample, Liver SKO	Abundance: F7: Sample, Liver WT	Abundance: F8: Sample, Liver HKO	Abundances Count: F5: Sample, Liver IgG	Abundances Count: F6: Sample, Liver SKO	Abundances Count: F7: Sample, Liver WT	Abundances Count: F8: Sample, Liver HKO	Modifications	Biological Process	Cellular Component	Molecular Function	Pfam IDs	Entrez Gene ID	Ensembl Gene ID	Gene Symbol	Chromosome	Reactome Pathways	KEGG Pathways	# Razor Peptides
High	Q8CFI7	DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus OX=10090 GN=Polr2b PE=1 SV=2	0	12.94	7	6	9	6	1174	133.8	6.87		2		1		2		1	3325027.961	2229450.891	1474789.578	209772.6641	2	4	2	2		metabolic process	membrane;nucleus	catalytic activity;DNA binding;metal ion binding;RNA binding	"Pf00562, Pf04560, Pf04561, Pf04563, Pf04565, Pf04566, Pf04567"	231329	ENSMUSG00000029250.5	Polr2b	5	mRNA Capping; RNA Polymerase II Transcription Initiation; Transcriptional regulation by small RNAs; RNA Polymerase II Pre-transcription Events; Formation of RNA Pol II elongation complex ; mRNA Splicing - Major Pathway; Formation of TC-NER Pre-Incision Complex; RNA Pol II CTD phosphorylation and interaction with CE; FGFR2 alternative splicing; mRNA Splicing - Minor Pathway; Dual incision in TC-NER; RNA polymerase II transcribes snRNA genes; Formation of the Early Elongation Complex; TP53 Regulates Transcription of DNA Repair Genes; Gap-filling DNA repair synthesis and ligation in TC-NER; RNA Polymerase II Promoter Escape; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening	RNA polymerase; Epstein-Barr virus infection; Metabolic pathways; Purine metabolism; Huntington's disease; Pyrimidine metabolism	0

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