Protein FDR Confidence: Combined	Accession	Description	Exp. q-value: Combined	Sum PEP Score	Coverage [%]	# Peptides	# PSMs	# Unique Peptides	# AAs	MW [kDa]	calc. pI	# Peptides (by Search Engine): E2 Sequest HT (Liver IgG)	# Peptides (by Search Engine): F2 Sequest HT (Liver SKO)	# Peptides (by Search Engine): G2 Sequest HT (Liver WT)	# Peptides (by Search Engine): H2 Sequest HT (Liver HKO)	# PSMs (by Search Engine): E2 Sequest HT (Liver IgG)	# PSMs (by Search Engine): F2 Sequest HT (Liver SKO)	# PSMs (by Search Engine): G2 Sequest HT (Liver WT)	# PSMs (by Search Engine): H2 Sequest HT (Liver HKO)	Abundance: F5: Sample, Liver IgG	Abundance: F6: Sample, Liver SKO	Abundance: F7: Sample, Liver WT	Abundance: F8: Sample, Liver HKO	Abundances Count: F5: Sample, Liver IgG	Abundances Count: F6: Sample, Liver SKO	Abundances Count: F7: Sample, Liver WT	Abundances Count: F8: Sample, Liver HKO	Modifications	Biological Process	Cellular Component	Molecular Function	Pfam IDs	Entrez Gene ID	Ensembl Gene ID	Gene Symbol	Chromosome	Reactome Pathways	KEGG Pathways	# Razor Peptides
High	Q9CQ71	Replication protein A 14 kDa subunit OS=Mus musculus OX=10090 GN=Rpa3 PE=1 SV=1	0	24.78	80	6	46	6	121	13.6	4.84									603392.2188	82870.17188	280025.9902	210032.0469	3	1	2	3		metabolic process;regulation of biological process;response to stimulus	nucleus	DNA binding	Pf08661	68240	ENSMUSG00000012483.4	Rpa3	6	Termination of translesion DNA synthesis; Translesion synthesis by POLI; Meiotic Recombination; M/G1 Transition; Activation of ATR in response to replication stress; Dual Incision in GG-NER; Removal of the Flap Intermediate; Translesion synthesis by POLK; Gap-filling DNA repair synthesis and ligation in TC-NER; Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta); Processing of DNA double-strand break ends; Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha); HDR through Single Strand Annealing (SSA); Regulation of HSF1-mediated heat shock response; Removal of the Flap Intermediate from the C-strand; Translesion Synthesis by POLH; Formation of Incision Complex in GG-NER; Gap-filling DNA repair synthesis and ligation in GG-NER; PCNA-Dependent Long Patch Base Excision Repair; Regulation of TP53 Activity through Phosphorylation; Presynaptic phase of homologous DNA pairing and strand exchange; Recognition of DNA damage by PCNA-containing replication complex; Dual incision in TC-NER; Fanconi Anemia Pathway; Activation of the pre-replicative complex; Translesion synthesis by REV1; G2/M DNA damage checkpoint; Mus musculus biological processes	DNA replication; Homologous recombination; Nucleotide excision repair; Fanconi anemia pathway; Mismatch repair	0

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