Protein FDR Confidence: Combined	Accession	Description	Exp. q-value: Combined	Sum PEP Score	Coverage [%]	# Peptides	# PSMs	# Unique Peptides	# AAs	MW [kDa]	calc. pI	# Peptides (by Search Engine): E2 Sequest HT (Liver IgG)	# Peptides (by Search Engine): F2 Sequest HT (Liver SKO)	# Peptides (by Search Engine): G2 Sequest HT (Liver WT)	# Peptides (by Search Engine): H2 Sequest HT (Liver HKO)	# PSMs (by Search Engine): E2 Sequest HT (Liver IgG)	# PSMs (by Search Engine): F2 Sequest HT (Liver SKO)	# PSMs (by Search Engine): G2 Sequest HT (Liver WT)	# PSMs (by Search Engine): H2 Sequest HT (Liver HKO)	Abundance: F5: Sample, Liver IgG	Abundance: F6: Sample, Liver SKO	Abundance: F7: Sample, Liver WT	Abundance: F8: Sample, Liver HKO	Abundances Count: F5: Sample, Liver IgG	Abundances Count: F6: Sample, Liver SKO	Abundances Count: F7: Sample, Liver WT	Abundances Count: F8: Sample, Liver HKO	Modifications	Biological Process	Cellular Component	Molecular Function	Pfam IDs	Entrez Gene ID	Ensembl Gene ID	Gene Symbol	Chromosome	Reactome Pathways	KEGG Pathways	# Razor Peptides
High	Q9WTX5	S-phase kinase-associated protein 1 OS=Mus musculus OX=10090 GN=Skp1 PE=1 SV=3	0	62.95	70	11	93	11	163	18.7	4.54	1	4	6	9	2	7	11	15	1406255.781	6266979.414	9812932.031	5568345.887	3	11	11	10		cell organization and biogenesis;metabolic process	cytoplasm;cytosol;nucleus	catalytic activity;protein binding	"Pf01466, Pf03931"	21402	ENSMUSG00000036309.14	Skp1a	11	NIK-->noncanonical NF-kB signaling; Degradation of beta-catenin by the destruction complex; Prolactin receptor signaling; SCF-beta-TrCP mediated degradation of Emi1; Regulation of RUNX2 expression and activity; SCF(Skp2)-mediated degradation of p27/p21; Neddylation; GLI3 is processed to GLI3R by the proteasome; Dectin-1 mediated noncanonical NF-kB signaling; Activation of NF-kappaB in B cells; Activated TLR4 signalling; Antigen processing: Ubiquitination & Proteasome degradation; Degradation of GLI1 by the proteasome; FCERI mediated NF-kB activation; Regulation of PLK1 Activity at G2/M Transition; Downstream TCR signaling; Cyclin D associated events in G1; Interleukin-1 family signaling; Iron uptake and transport; FBXL7 down-regulates AURKA during mitotic entry and in early mitosis; MAP3K8 (TPL2)-dependent MAPK1/3 activation	Herpes simplex infection; Wnt signaling pathway; Ubiquitin mediated proteolysis; Circadian rhythm; Oocyte meiosis; Cell cycle; TGF-beta signaling pathway; Protein processing in endoplasmic reticulum	0

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